Qubes-dist-upgrade upgraded my Qubes 4.1 to... Qubes 4.1

I wasted at least three hours to manually upgrade my Qubes 4.1 to new Qubes 4.2 in-place. Did exactly what was written in official upgrade manual (except I did 1-3 stages manually, one by one. Not --all-pre-reboot ). During the process there were few error messages (for example in 1 stage that it can’t fetch / resolve some addresses) but in general it looked that process is fine. In logs it was saying that it upgrades to 4.2 and the whole upgrading ended with no error messages saying that upgrade to 4.2 version is failed. But then I discovered that it still remains in 4.1. In fact qubes-dist-upgrade just re-installed dom0 and all templates and they remained on their old versions.

Attaching terminal logs containing error messages that I could find and save. Sorry, there are some logs in Russian, 'cause my system is in Russian, but I think the main part still remains understandable.

First one was taken during 2-3 stages:

Ошибка во время --release-upgrade (Stage 2)

Errors during downloading metadata for repository 'qubes-dom0-cached':
  - Curl error (37): Couldn't read a file:// file for file:///var/lib/qubes/updates/repodata/repomd.xml [Couldn't open file /var/lib/qubes/updates/repodata/repomd.xml]
Error: Не удалось загрузить метаданные для репозитория «qubes-dom0-cached»: Cannot download repomd.xml: Cannot download repodata/repomd.xml: All mirrors were tried
Игнорируется репозиториев: qubes-dom0-cached
Нет соответствия аргументу: google-noto-sans-fonts
Нет соответствия аргументу: google-noto-serif-fonts
Ошибка: Совпадений не найдено: google-noto-sans-fonts google-noto-serif-fonts


Ход выполнения фазы 3:


---> (STAGE 3) Upgrading to QubesOS R4.2 and Fedora 37 repositories...
INFO: Xscreensaver has been killed. Desktop won't lock before next reboot.
Using sys-whonix as UpdateVM to download updates for Dom0; this may take some time...
Qubes OS Repository for Dom0                    2.9 MB/s | 3.0 kB     00:00    
Qubes OS Repository for Dom0                    2.9 kB/s | 4.2 kB     00:01    
Последняя проверка окончания срока действия метаданных: 0:00:02 назад, Ср 20 дек 2023 15:43:22.

dracut.x86_64             050-63.git20200529.fc32              qubes-dom0-cached
Qubes OS Repository for Dom0                    2.9 MB/s | 3.0 kB     00:00    
Зависимости разрешены.
================================================================================
 Пакет      Архитектура
                       Версия                       Репозиторий           Размер
================================================================================
Обновление:
 dracut     x86_64     050-63.git20200529.fc32      qubes-dom0-cached     318 k
Установка слабых зависимостей:
 pigz       x86_64     2.4-6.fc32                   qubes-dom0-cached      74 k

Результат транзакции
================================================================================
Установка   1 Пакет
Обновление  1 Пакет

Общий размер: 392 k
DNF лишь загрузит пакеты для транзакции.
Продолжить? [д/Н]: y
Загрузка пакетов:
Выполнено!

dracut.x86_64             050-63.git20200529.fc32              qubes-dom0-cached
---> Shutdown all VM? [y/N] y
Qubes OS Repository for Dom0                    2.9 MB/s | 3.0 kB     00:00    
Зависимости разрешены.
================================================================================
 Пакет      Архитектура
                       Версия                       Репозиторий           Размер
================================================================================
Обновление:
 dracut     x86_64     050-63.git20200529.fc32      qubes-dom0-cached     318 k
Установка слабых зависимостей:
 pigz       x86_64     2.4-6.fc32                   qubes-dom0-cached      74 k

Результат транзакции
================================================================================
Установка   1 Пакет
Обновление  1 Пакет

Общий размер: 392 k
Продолжить? [д/Н]: y
Загрузка пакетов:
Проверка транзакции
Проверка транзакции успешно завершена.
Идет проверка транзакции
Тест транзакции проведен успешно
Выполнение транзакции
  Подготовка       :                                                        1/1 
  Запуск скриптлета: pigz-2.4-6.fc32.x86_64                                 1/1 
  Установка        : pigz-2.4-6.fc32.x86_64                                 1/3 
  Обновление       : dracut-050-63.git20200529.fc32.x86_64                  2/3 
  Запуск скриптлета: dracut-050-63.git20200529.fc32.x86_64                  2/3 
  Очистка          : dracut-050-61.git20200529.fc32.x86_64                  3/3 
  Запуск скриптлета: dracut-050-61.git20200529.fc32.x86_64                  3/3 
  Проверка         : pigz-2.4-6.fc32.x86_64                                 1/3 
  Проверка         : dracut-050-63.git20200529.fc32.x86_64                  2/3 
  Проверка         : dracut-050-61.git20200529.fc32.x86_64                  3/3 

Обновлен:
  dracut-050-63.git20200529.fc32.x86_64                                         
Установлен:
  pigz-2.4-6.fc32.x86_64                                                        

Выполнено!
INFO: Please ensure you have completed stages 1, 2 and 3 and reboot before continuing.

Then everything I could save from the last, final 4,5,6 stages:

________ __________________ __/etc/apt/sources.list.d/qubes-r4.list__
 ==> ______________ __ ______________ __________________ (________ ______ __________________).
 ==> __________ ____________ ______________________ ______________________ ____________.
 ==> ____ __________________ ______________________ ____________ ________ __________________.
______________________________ __________ ____________ __________ __________________ /etc/default/grub.d/30-qubes.cfg ___
______________________________ __________ ____________ __________ __________________ /etc/fstab ___
______________________________ __________ ____________ __________ __________________ /etc/qubes-rpc/qubes.GetDate ___
______________________________ __________ ____________ __________ __________________ /etc/qubes-rpc/qubes.GetImageRGBA ___
______________________________ __________ ____________ __________ __________________ /etc/qubes/post-install.d/10-qubes-core-agent-features.sh ___
______________________________ __________ ____________ __________ __________________ /etc/sysctl.d/80-qubes.conf ___
______________________________ __________ ____________ __________ __________________ /etc/systemd/system/xendriverdomain.service ___
Removed /etc/systemd/system/sysinit.target.wants/haveged.service.
Created symlink /etc/systemd/system/sysinit.target.wants/haveged.service ___ /lib/systemd/system/haveged.service.
______________________ ______________________ /etc/init/plymouth-shutdown.conf __ /etc/init/plymouth-shutdown.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/prefdm.conf __ /etc/init/prefdm.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/splash-manager.conf __ /etc/init/splash-manager.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/start-ttys.conf __ /etc/init/start-ttys.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/tty.conf __ /etc/init/tty.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/serial.conf __ /etc/init/serial.conf.qubes-orig ____-____ qubes-core-agent__
Traceback (most recent call last):
  File "/usr/bin/qvm-features-request", line 111, in <module>
    sys.exit(main())
  File "/usr/bin/qvm-features-request", line 102, in main
    subprocess.check_call(
  File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['qrexec-client-vm', 'dom0', 'qubes.FeaturesRequest']' returned non-zero exit status 1.
qubes-sync-time.service is a disabled or a static unit not running, not starting it.
qubes-update-check.service is a disabled or a static unit not running, not starting it.
Job for qubes-mount-dirs.service failed because the control process exited with error code.
See "systemctl status qubes-mount-dirs.service" and "journalctl -xe" for details.
__________________________ __________ qubes-core-agent-nautilus (4.2.26-1+deb11u1) ___
__________________________ __________ qubes-core-agent-dom0-updates (4.2.26-1+deb11u1) ___
__________________________ __________ xserver-xorg-input-qubes (4.2.11-1+deb11u1) ___
__________________________ __________ xserver-xorg-video-dummyqbs (4.2.11-1+deb11u1) ___
__________________________ __________ pulseaudio-qubes (4.2.11-1+deb11u1) ___
____________________________ ________________ ______ mailcap (3.69) ___
____________________________ ________________ ______ desktop-file-utils (0.26-1) ___
____________________________ ________________ ______ libglib2.0-0:amd64 (2.66.8-1) ___
____________________________ ________________ ______ libc-bin (2.31-13+deb11u7) ___
__________________________ __________ qubes-gui-agent (4.2.11-1+deb11u1) ___
______________________________ __________ ____________ __________ __________________ /etc/X11/xorg-qubes.conf.template ___
______________________________ __________ ____________ __________ __________________ /etc/qubes/post-install.d/20-qubes-guivm-gui-agent.sh ___
______________________________ __________ ____________ __________ __________________ /etc/security/limits.d/90-qubes-gui.conf ___
____________________________ ________________ ______ man-db (2.9.4-2) ___
__________________________ __________ qubes-core-agent-networking (4.2.26-1+deb11u1) ___
______________________________ __________ ____________ __________ __________________ /etc/udev/rules.d/99-qubes-network.rules ___
______________________________ __________ ____________ __________ __________________ /etc/xen/scripts/vif-qubes-nat.sh ___
______________________________ __________ ____________ __________ __________________ /etc/xen/scripts/vif-route-qubes ___
__________________________ __________ qubes-core-agent-network-manager (4.2.26-1+deb11u1) ___
__________________________ __________ qubes-vm-recommended (4.2.9-1+deb11u1) ___
__________________________ __________ qubes-vm-dependencies (4.2.9-1+deb11u1) ___
____________________________ ________________ ______ qubes-core-agent (4.2.26-1+deb11u1) ___
Traceback (most recent call last):
  File "/usr/bin/qvm-features-request", line 111, in <module>
    sys.exit(main())
  File "/usr/bin/qvm-features-request", line 102, in main
    subprocess.check_call(
  File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['qrexec-client-vm', 'dom0', 'qubes.FeaturesRequest']' returned non-zero exit status 1.
____________________________ ________________ ______ initramfs-tools (0.140) ___
update-initramfs: Generating /boot/initrd.img-5.10.0-26-amd64
+ rm -f /usr/sbin/policy-rc.d
----> Upgrading fedora-37...
+ [[ 0 -ne 0 ]]
+ '[' -e /etc/fedora-release ']'
++ awk '{print $3}' /etc/fedora-release
+ releasever=37
+ '[' 37 -lt 37 ']'
+ cp /etc/yum.repos.d/qubes-r4.repo /etc/yum.repos.d/qubes-r4.repo.bak
+ sed -i s/r4.1/r4.2/g /etc/yum.repos.d/qubes-r4.repo
+ sed -i s/4-primary/4.2-primary/g /etc/yum.repos.d/qubes-r4.repo
+ dnf clean all
50 files removed
+ dnf distro-sync -y --best --allowerasing
Fedora 37 - x86_64                              317 kB/s |  82 MB     04:23    
Fedora 37 openh264 (From Cisco) - x86_64        498  B/s | 2.5 kB     00:05    
Fedora 37 - x86_64 - Updates                    436 kB/s |  41 MB     01:35    
Qubes OS Repository for VM (updates)            240  B/s | 833  B     00:03    
Qubes OS Repository for VM (updates)            0.0  B/s |   0  B     00:00    
Errors during downloading metadata for repository 'qubes-vm-r4.2-current':
  - Curl error (37): Couldn't read a file:// file for file:///etc/pki/rpm-gpg/RPM-GPG-KEY-qubes-4.2-primary [Couldn't open file /etc/pki/rpm-gpg/RPM-GPG-KEY-qubes-4.2-primary]
Error: Failed to retrieve GPG key for repo 'qubes-vm-r4.2-current': Curl error (37): Couldn't read a file:// file for file:///etc/pki/rpm-gpg/RPM-GPG-KEY-qubes-4.2-primary [Couldn't open file /etc/pki/rpm-gpg/RPM-GPG-KEY-qubes-4.2-primary]
+ exit 3
ERROR: An error occurred during upgrade transaction for fedora-37.
-> Continue? [y/N] y
----> Upgrading whonix-gw-16...
+ [[ 0 -ne 0 ]]
+ '[' -e /etc/fedora-release ']'
+ '[' -e /etc/debian_version ']'
++ awk -F. '{print $1}' /etc/debian_version
+ releasever=11
+ '[' 11 -lt 11 ']'
+ cp /etc/apt/sources.list.d/qubes-r4.list /etc/apt/sources.list.d/qubes-r4.list.bak
+ sed -i s/r4.1/r4.2/g /etc/apt/sources.list.d/qubes-r4.list
+ sed -i 's/arch=amd64/arch=amd64\ signed-by=\/usr\/share\/keyrings\/qubes-archive-keyring-4.2.gpg/g' /etc/apt/sources.list.d/qubes-r4.list
+ export DEBIAN_FRONTEND=noninteractive
+ DEBIAN_FRONTEND=noninteractive
+ apt-get clean
+ apt-get update -o Dpkg::Options::=--force-confdef
______:1 https://deb.qubes-os.org/r4.2/vm bullseye InRelease [2___513 B]
______:2 tor+https://deb.debian.org/debian bullseye InRelease
______:3 tor+https://deb.kicksecure.com bullseye InRelease [39,7 kB]
______:4 tor+https://fasttrack.debian.net/debian bullseye-fasttrack InRelease [12,9 kB]
______:5 tor+https://deb.whonix.org bullseye InRelease [39,7 kB]
______:6 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 Packages [24,1 kB]
______:7 tor+https://deb.debian.org/debian bullseye-updates InRelease [44,1 kB]
______:8 tor+https://deb.debian.org/debian-security bullseye-security InRelease [48,4 kB]
______:9 tor+https://deb.debian.org/debian bullseye-backports InRelease [49,0 kB]
______:10 tor+https://deb.debian.org/debian-security bullseye-security/main amd64 Packages [260 kB]
________________ 520 kB ____ 7__ (76,3 kB/s)
____________ ______________ _________________
+ cat
+ chmod 755 /usr/sbin/policy-rc.d
+ trap 'rm -f /usr/sbin/policy-rc.d' EXIT
+ apt-get dist-upgrade -y --no-install-recommends -o Dpkg::Options::=--force-confdef
____________ ______________ _________________
____________________ ____________ ___________________________
____________ ____________________ __ _____________________
____________ _______________________
__________________ ____________ ______________________________ __________________________ __ ____________ ____ __________________:
  imagemagick imagemagick-6-common imagemagick-6.q16 libaom0 libdav1d4
  libde265-0 libfftw3-double3 libheif1 liblqr-1-0 libmagickcore-6.q16-6
  libmagickwand-6.q16-6 libnuma1 libopengl0 libvchan-xen libx265-192
______ ____ ________________ ______________________ __apt autoremove__.
__________________ __________ ____________ __________ ______________________:
  graphicsmagick libgraphicsmagick-q16-3 libqubes-pure0 libvchan-xen1
  libwmf0.2-7 python3-pyinotify python3-qrexec
__________________ ____________ __________ __________________:
  libjavascriptcoregtk-4.0-18 libqrexec-utils2 libqubes-rpc-filecopy2
  libqubesdb libwebkit2gtk-4.0-37 python3-qubesdb qubes-core-agent
  qubes-core-agent-dom0-updates qubes-core-agent-nautilus
  qubes-core-agent-networking qubes-core-agent-passwordless-root
  qubes-core-agent-thunar qubes-core-qrexec qubes-gui-agent
  qubes-kernel-vm-support qubes-mgmt-salt-vm-connector qubes-repo-templates
  qubes-utils qubes-vm-dependencies qubesdb qubesdb-vm xserver-common
  xserver-xorg-core xserver-xorg-input-qubes xserver-xorg-qubes-common
  xserver-xorg-video-dummyqbs
__________________ 26 ______________, ______________________ 7 __________ ______________, ______ ________________ ________________ 0 ______________, __ 0 ______________ ____ __________________.
____________________ ______________ 33,7 MB ______________.
__________ ____________ ________________ __________ ________________ __________________ ________________________ __________________ ____ 10,1 MB.
______:1 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 python3-qrexec amd64 4.2.16-1+deb11u1 [71,7 kB]
______:2 tor+https://deb.debian.org/debian bullseye/main amd64 libwmf0.2-7 amd64 0.2.8.4-17 [165 kB]
______:3 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 libvchan-xen1 amd64 4.2.1-1+deb11u1 [10,2 kB]
______:4 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-qrexec amd64 4.2.16-1+deb11u1 [31,8 kB]
______:5 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 libqrexec-utils2 amd64 4.2.16-1+deb11u1 [25,8 kB]
______:6 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 libqubes-rpc-filecopy2 amd64 4.2.15+deb11u1 [21,0 kB]
______:7 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 libqubes-pure0 amd64 4.2.15+deb11u1 [16,1 kB]
______:8 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 python3-qubesdb amd64 4.2.4-1+deb11u1 [11,6 kB]
______:9 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 libqubesdb amd64 4.2.4-1+deb11u1 [11,5 kB]
______:10 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-agent-networking amd64 4.2.26-1+deb11u1 [48,4 kB]
______:11 tor+https://deb.debian.org/debian bullseye/main amd64 libgraphicsmagick-q16-3 amd64 1.4+really1.3.36+hg16481-2+deb11u1 [1___167 kB]
______:12 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-utils amd64 4.2.15+deb11u1 [25,4 kB]
______:13 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-agent-thunar amd64 4.2.26-1+deb11u1 [38,5 kB]
______:14 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-agent-passwordless-root amd64 4.2.26-1+deb11u1 [39,8 kB]
______:15 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-agent-nautilus amd64 4.2.26-1+deb11u1 [37,4 kB]
______:16 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-repo-templates amd64 4.2.2-1+deb11u1 [3___716 B]
______:17 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-agent-dom0-updates amd64 4.2.26-1+deb11u1 [43,5 kB]
______:18 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubesdb amd64 4.2.4-1+deb11u1 [20,7 kB]
______:19 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubesdb-vm amd64 4.2.4-1+deb11u1 [7___660 B]
______:20 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-agent amd64 4.2.26-1+deb11u1 [116 kB]
______:21 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 xserver-xorg-video-dummyqbs amd64 4.2.11-1+deb11u1 [27,0 kB]
______:22 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-gui-agent amd64 4.2.11-1+deb11u1 [51,2 kB]
______:23 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 xserver-xorg-input-qubes amd64 4.2.11-1+deb11u1 [21,1 kB]
______:24 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 xserver-xorg-qubes-common amd64 4.2.11-1+deb11u1 [18,0 kB]
______:25 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-kernel-vm-support amd64 4.2.15+deb11u1 [16,8 kB]
______:26 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-mgmt-salt-vm-connector all 4.2.1-1+deb11u1 [8___464 B]
______:27 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-vm-dependencies amd64 4.2.9-1+deb11u1 [4___232 B]
______:28 tor+https://deb.debian.org/debian bullseye/main amd64 graphicsmagick amd64 1.4+really1.3.36+hg16481-2+deb11u1 [1___010 kB]
______:29 tor+https://deb.debian.org/debian-security bullseye-security/main amd64 libwebkit2gtk-4.0-37 amd64 2.42.4-1~deb11u1 [18,3 MB]
______:30 tor+https://deb.debian.org/debian-security bullseye-security/main amd64 libjavascriptcoregtk-4.0-18 amd64 2.42.4-1~deb11u1 [6___483 kB]
______:31 tor+https://deb.debian.org/debian bullseye/main amd64 python3-pyinotify all 0.9.6-1.3 [27,2 kB]
______:32 tor+https://deb.debian.org/debian-security bullseye-security/main amd64 xserver-common all 2:1.20.11-1+deb11u10 [2___284 kB]
______:33 tor+https://deb.debian.org/debian-security bullseye-security/main amd64 xserver-xorg-core amd64 2:1.20.11-1+deb11u10 [3___603 kB]
________________ 33,7 MB ____ 1______ 36__ (351 kB/s)
__________ __________ ____ ____________________ ____________ libwmf0.2-7:amd64.
(____________ ________ ____________ ___ ____ ____________ ____________ ______________________ 51988 ____________ __ __________________.)
____________________ __ ____________________ ___/00-libwmf0.2-7_0.2.8.4-17_amd64.deb ___
______________________________ libwmf0.2-7:amd64 (0.2.8.4-17) ___
__________ __________ ____ ____________________ ____________ libgraphicsmagick-q16-3.
____________________ __ ____________________ ___/01-libgraphicsmagick-q16-3_1.4+really1.3.36+hg16481-2+deb11u1_amd64.deb ___
______________________________ libgraphicsmagick-q16-3 (1.4+really1.3.36+hg16481-2+deb11u1) ___
__________ __________ ____ ____________________ ____________ graphicsmagick.
____________________ __ ____________________ ___/02-graphicsmagick_1.4+really1.3.36+hg16481-2+deb11u1_amd64.deb ___
______________________________ graphicsmagick (1.4+really1.3.36+hg16481-2+deb11u1) ___
____________________ __ ____________________ ___/03-libwebkit2gtk-4.0-37_2.42.4-1~deb11u1_amd64.deb ___
______________________________ libwebkit2gtk-4.0-37:amd64 (2.42.4-1~deb11u1) ____ ____________ (2.42.3-1~deb11u1) ___
____________________ __ ____________________ ___/04-libjavascriptcoregtk-4.0-18_2.42.4-1~deb11u1_amd64.deb ___
______________________________ libjavascriptcoregtk-4.0-18:amd64 (2.42.4-1~deb11u1) ____ ____________ (2.42.3-1~deb11u1) ___
__________ __________ ____ ____________________ ____________ python3-pyinotify.
____________________ __ ____________________ ___/05-python3-pyinotify_0.9.6-1.3_all.deb ___
______________________________ python3-pyinotify (0.9.6-1.3) ___
__________ __________ ____ ____________________ ____________ python3-qrexec.
____________________ __ ____________________ ___/06-python3-qrexec_4.2.16-1+deb11u1_amd64.deb ___
______________________________ python3-qrexec (4.2.16-1+deb11u1) ___
__________ __________ ____ ____________________ ____________ libvchan-xen1.
____________________ __ ____________________ ___/07-libvchan-xen1_4.2.1-1+deb11u1_amd64.deb ___
______________________________ libvchan-xen1 (4.2.1-1+deb11u1) ___
____________________ __ ____________________ ___/08-qubes-core-qrexec_4.2.16-1+deb11u1_amd64.deb ___
______________________________ qubes-core-qrexec (4.2.16-1+deb11u1) ____ ____________ (4.1.24-1+deb11u1) ___
____________________ __ ____________________ ___/09-libqrexec-utils2_4.2.16-1+deb11u1_amd64.deb ___
______________________________ libqrexec-utils2 (4.2.16-1+deb11u1) ____ ____________ (4.1.24-1+deb11u1) ___
____________________ __ ____________________ ___/10-xserver-common_2%3a1.20.11-1+deb11u10_all.deb ___
______________________________ xserver-common (2:1.20.11-1+deb11u10) ____ ____________ (2:1.20.11-1+deb11u9) ___
____________________ __ ____________________ ___/11-xserver-xorg-core_2%3a1.20.11-1+deb11u10_amd64.deb ___
______________________________ xserver-xorg-core (2:1.20.11-1+deb11u10) ____ ____________ (2:1.20.11-1+deb11u9) ___
____________________ __ ____________________ ___/12-libqubes-rpc-filecopy2_4.2.15+deb11u1_amd64.deb ___
______________________________ libqubes-rpc-filecopy2 (4.2.15+deb11u1) ____ ____________ (4.1.19+deb11u1) ___
__________ __________ ____ ____________________ ____________ libqubes-pure0.
____________________ __ ____________________ ___/13-libqubes-pure0_4.2.15+deb11u1_amd64.deb ___
______________________________ libqubes-pure0 (4.2.15+deb11u1) ___
____________________ __ ____________________ ___/14-python3-qubesdb_4.2.4-1+deb11u1_amd64.deb ___
______________________________ python3-qubesdb (4.2.4-1+deb11u1) ____ ____________ (4.1.17-1+deb11u1) ___
____________________ __ ____________________ ___/15-libqubesdb_4.2.4-1+deb11u1_amd64.deb ___
______________________________ libqubesdb (4.2.4-1+deb11u1) ____ ____________ (4.1.17-1+deb11u1) ___
____________________ __ ____________________ ___/16-qubes-core-agent-networking_4.2.26-1+deb11u1_amd64.deb ___
______________________________ qubes-core-agent-networking (4.2.26-1+deb11u1) ____ ____________ (4.1.46-1+deb11u1) ___
____________________ __ ____________________ ___/17-qubes-utils_4.2.15+deb11u1_amd64.deb ___
______________________________ qubes-utils (4.2.15+deb11u1) ____ ____________ (4.1.19+deb11u1) ___
____________________ __ ____________________ ___/18-qubes-core-agent-thunar_4.2.26-1+deb11u1_amd64.deb ___
______________________________ qubes-core-agent-thunar (4.2.26-1+deb11u1) ____ ____________ (4.1.46-1+deb11u1) ___
____________________ __ ____________________ ___/19-qubes-core-agent-passwordless-root_4.2.26-1+deb11u1_amd64.deb ___
______________________________ qubes-core-agent-passwordless-root (4.2.26-1+deb11u1) ____ ____________ (4.1.46-1+deb11u1) ___
____________________ __ ____________________ ___/20-qubes-core-agent-nautilus_4.2.26-1+deb11u1_amd64.deb ___
______________________________ qubes-core-agent-nautilus (4.2.26-1+deb11u1) ____ ____________ (4.1.46-1+deb11u1) ___
____________________ __ ____________________ ___/21-qubes-repo-templates_4.2.2-1+deb11u1_amd64.deb ___
______________________________ qubes-repo-templates (4.2.2-1+deb11u1) ____ ____________ (4.1.2-1+deb11u1) ___
____________________ __ ____________________ ___/22-qubes-core-agent-dom0-updates_4.2.26-1+deb11u1_amd64.deb ___
______________________________ qubes-core-agent-dom0-updates (4.2.26-1+deb11u1) ____ ____________ (4.1.46-1+deb11u1) ___
____________________ __ ____________________ ___/23-qubesdb_4.2.4-1+deb11u1_amd64.deb ___
______________________________ qubesdb (4.2.4-1+deb11u1) ____ ____________ (4.1.17-1+deb11u1) ___
____________________ __ ____________________ ___/24-qubesdb-vm_4.2.4-1+deb11u1_amd64.deb ___
______________________________ qubesdb-vm (4.2.4-1+deb11u1) ____ ____________ (4.1.17-1+deb11u1) ___
____________________ __ ____________________ ___/25-qubes-core-agent_4.2.26-1+deb11u1_amd64.deb ___
______________________________ qubes-core-agent (4.2.26-1+deb11u1) ____ ____________ (4.1.46-1+deb11u1) ___
____________________ __ ____________________ ___/26-xserver-xorg-video-dummyqbs_4.2.11-1+deb11u1_amd64.deb ___
______________________________ xserver-xorg-video-dummyqbs (4.2.11-1+deb11u1) ____ ____________ (4.1.32-1+deb11u1) ___
____________________ __ ____________________ ___/27-qubes-gui-agent_4.2.11-1+deb11u1_amd64.deb ___
______________________________ qubes-gui-agent (4.2.11-1+deb11u1) ____ ____________ (4.1.32-1+deb11u1) ___
____________________ __ ____________________ ___/28-xserver-xorg-input-qubes_4.2.11-1+deb11u1_amd64.deb ___
______________________________ xserver-xorg-input-qubes (4.2.11-1+deb11u1) ____ ____________ (4.1.32-1+deb11u1) ___
____________________ __ ____________________ ___/29-xserver-xorg-qubes-common_4.2.11-1+deb11u1_amd64.deb ___
______________________________ xserver-xorg-qubes-common (4.2.11-1+deb11u1) ____ ____________ (4.1.32-1+deb11u1) ___
____________________ __ ____________________ ___/30-qubes-kernel-vm-support_4.2.15+deb11u1_amd64.deb ___
______________________________ qubes-kernel-vm-support (4.2.15+deb11u1) ____ ____________ (4.1.19+deb11u1) ___
____________________ __ ____________________ ___/31-qubes-mgmt-salt-vm-connector_4.2.1-1+deb11u1_all.deb ___
______________________________ qubes-mgmt-salt-vm-connector (4.2.1-1+deb11u1) ____ ____________ (4.1.16-1+deb11u1) ___
____________________ __ ____________________ ___/32-qubes-vm-dependencies_4.2.9-1+deb11u1_amd64.deb ___
______________________________ qubes-vm-dependencies (4.2.9-1+deb11u1) ____ ____________ (4.1.24-1+deb11u1) ___
__________________________ __________ libvchan-xen1 (4.2.1-1+deb11u1) ___
__________________________ __________ qubes-repo-templates (4.2.2-1+deb11u1) ___
__________________________ __________ libwmf0.2-7:amd64 (0.2.8.4-17) ___
__________________________ __________ qubes-mgmt-salt-vm-connector (4.2.1-1+deb11u1) ___
______________________________ __________ ____________ __________ __________________ /etc/qubes-rpc/qubes.SaltLinuxVM ___
__________________________ __________ python3-pyinotify (0.9.6-1.3) ___
__________________________ __________ libjavascriptcoregtk-4.0-18:amd64 (2.42.4-1~deb11u1) ___
__________________________ __________ qubes-core-agent-passwordless-root (4.2.26-1+deb11u1) ___
__________________________ __________ qubes-utils (4.2.15+deb11u1) ___
__________________________ __________ python3-qrexec (4.2.16-1+deb11u1) ___
__________________________ __________ libgraphicsmagick-q16-3 (1.4+really1.3.36+hg16481-2+deb11u1) ___
__________________________ __________ xserver-xorg-qubes-common (4.2.11-1+deb11u1) ___
__________________________ __________ qubes-kernel-vm-support (4.2.15+deb11u1) ___
update-initramfs: deferring update (trigger activated)
Generating grub configuration file ...
Warning: os-prober will not be executed to detect other bootable partitions.
Systems on them will not be added to the GRUB boot configuration.
Check GRUB_DISABLE_OS_PROBER documentation entry.
done
__________________________ __________ libqubesdb (4.2.4-1+deb11u1) ___
__________________________ __________ libwebkit2gtk-4.0-37:amd64 (2.42.4-1~deb11u1) ___
__________________________ __________ python3-qubesdb (4.2.4-1+deb11u1) ___
__________________________ __________ xserver-common (2:1.20.11-1+deb11u10) ___
__________________________ __________ libqubes-pure0 (4.2.15+deb11u1) ___
__________________________ __________ libqrexec-utils2 (4.2.16-1+deb11u1) ___
__________________________ __________ qubesdb (4.2.4-1+deb11u1) ___
__________________________ __________ qubesdb-vm (4.2.4-1+deb11u1) ___
__________________________ __________ qubes-core-qrexec (4.2.16-1+deb11u1) ___
/usr/sbin/policy-rc.d returned 101, not running 'restart qubes-qrexec-agent.service'
__________________________ __________ graphicsmagick (1.4+really1.3.36+hg16481-2+deb11u1) ___
__________________________ __________ xserver-xorg-core (2:1.20.11-1+deb11u10) ___
__________________________ __________ libqubes-rpc-filecopy2 (4.2.15+deb11u1) ___
__________________________ __________ qubes-core-agent-nautilus (4.2.26-1+deb11u1) ___
__________________________ __________ qubes-core-agent-dom0-updates (4.2.26-1+deb11u1) ___
__________________________ __________ xserver-xorg-input-qubes (4.2.11-1+deb11u1) ___
__________________________ __________ xserver-xorg-video-dummyqbs (4.2.11-1+deb11u1) ___
__________________________ __________ qubes-core-agent-thunar (4.2.26-1+deb11u1) ___
____________________________ ________________ ______ menu (2.1.48) ___
____________________________ ________________ ______ desktop-file-utils (0.26-1) ___
____________________________ ________________ ______ libglib2.0-0:amd64 (2.66.8-1) ___
____________________________ ________________ ______ libc-bin (2.31-13+deb11u7) ___
____________________________ ________________ ______ man-db (2.9.4-2) ___
__________________________ __________ qubes-core-agent (4.2.26-1+deb11u1) ___

________ __________________ __/etc/apt/sources.list.d/qubes-r4.list__
 ==> ______________ __ ______________ __________________ (________ ______ __________________).
 ==> __________ ____________ ______________________ ______________________ ____________.
 ==> ____ __________________ ______________________ ____________ ________ __________________.
______________________________ __________ ____________ __________ __________________ /etc/default/grub.d/30-qubes.cfg ___
______________________________ __________ ____________ __________ __________________ /etc/fstab ___
______________________________ __________ ____________ __________ __________________ /etc/qubes-rpc/qubes.GetDate ___
______________________________ __________ ____________ __________ __________________ /etc/qubes-rpc/qubes.GetImageRGBA ___
______________________________ __________ ____________ __________ __________________ /etc/qubes/post-install.d/10-qubes-core-agent-features.sh ___
______________________________ __________ ____________ __________ __________________ /etc/sysctl.d/80-qubes.conf ___
______________________________ __________ ____________ __________ __________________ /etc/systemd/system/xendriverdomain.service ___
Removed /etc/systemd/system/sysinit.target.wants/haveged.service.
Created symlink /etc/systemd/system/sysinit.target.wants/haveged.service ___ /lib/systemd/system/haveged.service.
______________________ ______________________ /etc/init/plymouth-shutdown.conf __ /etc/init/plymouth-shutdown.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/prefdm.conf __ /etc/init/prefdm.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/splash-manager.conf __ /etc/init/splash-manager.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/start-ttys.conf __ /etc/init/start-ttys.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/tty.conf __ /etc/init/tty.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/serial.conf __ /etc/init/serial.conf.qubes-orig ____-____ qubes-core-agent__
Traceback (most recent call last):
  File "/usr/bin/qvm-features-request", line 111, in <module>
    sys.exit(main())
  File "/usr/bin/qvm-features-request", line 102, in main
    subprocess.check_call(
  File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['qrexec-client-vm', 'dom0', 'qubes.FeaturesRequest']' returned non-zero exit status 1.
qubes-sync-time.service is a disabled or a static unit not running, not starting it.
qubes-update-check.service is a disabled or a static unit not running, not starting it.
Job for qubes-mount-dirs.service failed because the control process exited with error code.
See "systemctl status qubes-mount-dirs.service" and "journalctl -xe" for details.
__________________________ __________ qubes-core-agent-networking (4.2.26-1+deb11u1) ___
______________________________ __________ ____________ __________ __________________ /etc/udev/rules.d/99-qubes-network.rules ___
______________________________ __________ ____________ __________ __________________ /etc/xen/scripts/vif-qubes-nat.sh ___
______________________________ __________ ____________ __________ __________________ /etc/xen/scripts/vif-route-qubes ___
__________________________ __________ qubes-gui-agent (4.2.11-1+deb11u1) ___
______________________________ __________ ____________ __________ __________________ /etc/X11/xorg-qubes.conf.template ___
______________________________ __________ ____________ __________ __________________ /etc/qubes/post-install.d/20-qubes-guivm-gui-agent.sh ___
______________________________ __________ ____________ __________ __________________ /etc/security/limits.d/90-qubes-gui.conf ___
__________________________ __________ qubes-vm-dependencies (4.2.9-1+deb11u1) ___
____________________________ ________________ ______ initramfs-tools (0.140) ___
____________________________ ________________ ______ qubes-core-agent (4.2.26-1+deb11u1) ___
Traceback (most recent call last):
  File "/usr/bin/qvm-features-request", line 111, in <module>
    sys.exit(main())
  File "/usr/bin/qvm-features-request", line 102, in main
    subprocess.check_call(
  File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['qrexec-client-vm', 'dom0', 'qubes.FeaturesRequest']' returned non-zero exit status 1.
+ rm -f /usr/sbin/policy-rc.d
----> Upgrading whonix-ws-16...
+ [[ 0 -ne 0 ]]
+ '[' -e /etc/fedora-release ']'
+ '[' -e /etc/debian_version ']'
++ awk -F. '{print $1}' /etc/debian_version
+ releasever=11
+ '[' 11 -lt 11 ']'
+ cp /etc/apt/sources.list.d/qubes-r4.list /etc/apt/sources.list.d/qubes-r4.list.bak
+ sed -i s/r4.1/r4.2/g /etc/apt/sources.list.d/qubes-r4.list
+ sed -i 's/arch=amd64/arch=amd64\ signed-by=\/usr\/share\/keyrings\/qubes-archive-keyring-4.2.gpg/g' /etc/apt/sources.list.d/qubes-r4.list
+ export DEBIAN_FRONTEND=noninteractive
+ DEBIAN_FRONTEND=noninteractive
+ apt-get clean
+ apt-get update -o Dpkg::Options::=--force-confdef
______:1 tor+https://deb.kicksecure.com bullseye InRelease
______:2 tor+https://fasttrack.debian.net/debian bullseye-fasttrack InRelease [12,9 kB]
______:3 https://deb.qubes-os.org/r4.2/vm bullseye InRelease [2___513 B]
______:4 tor+https://deb.debian.org/debian bullseye InRelease
______:5 tor+https://deb.whonix.org bullseye InRelease
______:6 tor+https://deb.debian.org/debian bullseye-updates InRelease
______:7 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 Packages [24,1 kB]
______:8 tor+https://deb.debian.org/debian-security bullseye-security InRelease
______:9 tor+https://deb.debian.org/debian bullseye-backports InRelease
________________ 39,5 kB ____ 3__ (14,0 kB/s)
____________ ______________ _________________
+ cat
+ chmod 755 /usr/sbin/policy-rc.d
+ trap 'rm -f /usr/sbin/policy-rc.d' EXIT
+ apt-get dist-upgrade -y --no-install-recommends -o Dpkg::Options::=--force-confdef
____________ ______________ _________________
____________________ ____________ ___________________________
____________ ____________________ __ _____________________
____________ _______________________
__________________ ____________ ______________________________ __________________________ __ ____________ ____ __________________:
  imagemagick imagemagick-6-common imagemagick-6.q16 libde265-0 libheif1
  liblqr-1-0 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libopengl0
  libvchan-xen monero-gui
______ ____ ________________ ______________________ __apt autoremove__.
__________________ __________ ____________ __________ ______________________:
  libqubes-pure0 libvchan-xen1 python3-pyinotify python3-qrexec
__________________ ____________ __________ __________________:
  libqrexec-utils2 libqubes-rpc-filecopy2 libqubesdb pulseaudio-qubes
  python3-qubesdb python3-qubesimgconverter qubes-core-agent
  qubes-core-agent-nautilus qubes-core-agent-networking
  qubes-core-agent-passwordless-root qubes-core-agent-thunar qubes-core-qrexec
  qubes-gui-agent qubes-kernel-vm-support qubes-mgmt-salt-vm-connector
  qubes-utils qubes-vm-dependencies qubesdb qubesdb-vm
  xserver-xorg-input-qubes xserver-xorg-qubes-common
  xserver-xorg-video-dummyqbs
__________________ 22 ______________, ______________________ 4 __________ ______________, ______ ________________ ________________ 0 ______________, __ 0 ______________ ____ __________________.
____________________ ______________ 762 kB ______________.
__________ ____________ ________________ __________ ________________ __________________ ________________________ __________________ ____ 841 kB.
______:1 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 python3-qrexec amd64 4.2.16-1+deb11u1 [71,7 kB]
______:2 tor+https://deb.debian.org/debian bullseye/main amd64 python3-pyinotify all 0.9.6-1.3 [27,2 kB]
______:3 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 libvchan-xen1 amd64 4.2.1-1+deb11u1 [10,2 kB]
______:4 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-qrexec amd64 4.2.16-1+deb11u1 [31,8 kB]
______:5 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 libqrexec-utils2 amd64 4.2.16-1+deb11u1 [25,8 kB]
______:6 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 libqubes-rpc-filecopy2 amd64 4.2.15+deb11u1 [21,0 kB]
______:7 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 libqubes-pure0 amd64 4.2.15+deb11u1 [16,1 kB]
______:8 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 python3-qubesdb amd64 4.2.4-1+deb11u1 [11,6 kB]
______:9 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 libqubesdb amd64 4.2.4-1+deb11u1 [11,5 kB]
______:10 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-agent-networking amd64 4.2.26-1+deb11u1 [48,4 kB]
______:11 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 python3-qubesimgconverter amd64 4.2.15+deb11u1 [25,8 kB]
______:12 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-utils amd64 4.2.15+deb11u1 [25,4 kB]
______:13 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-agent-thunar amd64 4.2.26-1+deb11u1 [38,5 kB]
______:14 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-agent-passwordless-root amd64 4.2.26-1+deb11u1 [39,8 kB]
______:15 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-agent-nautilus amd64 4.2.26-1+deb11u1 [37,4 kB]
______:16 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubesdb amd64 4.2.4-1+deb11u1 [20,7 kB]
______:17 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubesdb-vm amd64 4.2.4-1+deb11u1 [7___660 B]
______:18 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-core-agent amd64 4.2.26-1+deb11u1 [116 kB]
______:19 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 pulseaudio-qubes amd64 4.2.11-1+deb11u1 [29,4 kB]
______:20 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 xserver-xorg-video-dummyqbs amd64 4.2.11-1+deb11u1 [27,0 kB]
______:21 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-gui-agent amd64 4.2.11-1+deb11u1 [51,2 kB]
______:22 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 xserver-xorg-input-qubes amd64 4.2.11-1+deb11u1 [21,1 kB]
______:23 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 xserver-xorg-qubes-common amd64 4.2.11-1+deb11u1 [18,0 kB]
______:24 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-kernel-vm-support amd64 4.2.15+deb11u1 [16,8 kB]
______:25 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-mgmt-salt-vm-connector all 4.2.1-1+deb11u1 [8___464 B]
______:26 https://deb.qubes-os.org/r4.2/vm bullseye/main amd64 qubes-vm-dependencies amd64 4.2.9-1+deb11u1 [4___232 B]
________________ 762 kB ____ 4__ (197 kB/s)
__________ __________ ____ ____________________ ____________ python3-pyinotify.
(____________ ________ ____________ ___ ____ ____________ ____________ ______________________ 60449 ____________ __ __________________.)
____________________ __ ____________________ ___/00-python3-pyinotify_0.9.6-1.3_all.deb ___
______________________________ python3-pyinotify (0.9.6-1.3) ___
__________ __________ ____ ____________________ ____________ python3-qrexec.
____________________ __ ____________________ ___/01-python3-qrexec_4.2.16-1+deb11u1_amd64.deb ___
______________________________ python3-qrexec (4.2.16-1+deb11u1) ___
__________ __________ ____ ____________________ ____________ libvchan-xen1.
____________________ __ ____________________ ___/02-libvchan-xen1_4.2.1-1+deb11u1_amd64.deb ___
______________________________ libvchan-xen1 (4.2.1-1+deb11u1) ___
____________________ __ ____________________ ___/03-qubes-core-qrexec_4.2.16-1+deb11u1_amd64.deb ___
______________________________ qubes-core-qrexec (4.2.16-1+deb11u1) ____ ____________ (4.1.24-1+deb11u1) ___
____________________ __ ____________________ ___/04-libqrexec-utils2_4.2.16-1+deb11u1_amd64.deb ___
______________________________ libqrexec-utils2 (4.2.16-1+deb11u1) ____ ____________ (4.1.24-1+deb11u1) ___
____________________ __ ____________________ ___/05-libqubes-rpc-filecopy2_4.2.15+deb11u1_amd64.deb ___
______________________________ libqubes-rpc-filecopy2 (4.2.15+deb11u1) ____ ____________ (4.1.19+deb11u1) ___
__________ __________ ____ ____________________ ____________ libqubes-pure0.
____________________ __ ____________________ ___/06-libqubes-pure0_4.2.15+deb11u1_amd64.deb ___
______________________________ libqubes-pure0 (4.2.15+deb11u1) ___
____________________ __ ____________________ ___/07-python3-qubesdb_4.2.4-1+deb11u1_amd64.deb ___
______________________________ python3-qubesdb (4.2.4-1+deb11u1) ____ ____________ (4.1.17-1+deb11u1) ___
____________________ __ ____________________ ___/08-libqubesdb_4.2.4-1+deb11u1_amd64.deb ___
______________________________ libqubesdb (4.2.4-1+deb11u1) ____ ____________ (4.1.17-1+deb11u1) ___
____________________ __ ____________________ ___/09-qubes-core-agent-networking_4.2.26-1+deb11u1_amd64.deb ___
______________________________ qubes-core-agent-networking (4.2.26-1+deb11u1) ____ ____________ (4.1.46-1+deb11u1) ___
____________________ __ ____________________ ___/10-python3-qubesimgconverter_4.2.15+deb11u1_amd64.deb ___
______________________________ python3-qubesimgconverter (4.2.15+deb11u1) ____ ____________ (4.1.19+deb11u1) ___
____________________ __ ____________________ ___/11-qubes-utils_4.2.15+deb11u1_amd64.deb ___
______________________________ qubes-utils (4.2.15+deb11u1) ____ ____________ (4.1.19+deb11u1) ___
____________________ __ ____________________ ___/12-qubes-core-agent-thunar_4.2.26-1+deb11u1_amd64.deb ___
______________________________ qubes-core-agent-thunar (4.2.26-1+deb11u1) ____ ____________ (4.1.46-1+deb11u1) ___
____________________ __ ____________________ ___/13-qubes-core-agent-passwordless-root_4.2.26-1+deb11u1_amd64.deb ___
______________________________ qubes-core-agent-passwordless-root (4.2.26-1+deb11u1) ____ ____________ (4.1.46-1+deb11u1) ___
____________________ __ ____________________ ___/14-qubes-core-agent-nautilus_4.2.26-1+deb11u1_amd64.deb ___
______________________________ qubes-core-agent-nautilus (4.2.26-1+deb11u1) ____ ____________ (4.1.46-1+deb11u1) ___
____________________ __ ____________________ ___/15-qubesdb_4.2.4-1+deb11u1_amd64.deb ___
______________________________ qubesdb (4.2.4-1+deb11u1) ____ ____________ (4.1.17-1+deb11u1) ___
____________________ __ ____________________ ___/16-qubesdb-vm_4.2.4-1+deb11u1_amd64.deb ___
______________________________ qubesdb-vm (4.2.4-1+deb11u1) ____ ____________ (4.1.17-1+deb11u1) ___
dpkg: ______________________________ ________________ pulseaudio-qubes, ____________ ________________ __________ ______________________ qubes-core-agent ___
dpkg: ____, __________ pulseaudio-qubes __________ ____________, __________ __________ ________ ____________________ qubes-core-agent
____________________ __ ____________________ ___/17-qubes-core-agent_4.2.26-1+deb11u1_amd64.deb ___
__________________________________ qubes-whonix-workstation-packages-recommended (1:17.3-1), __________ __________ ________ ______________ pulseaudio-qubes (4.1.32-1+deb11u1) ___
______________________________ qubes-core-agent (4.2.26-1+deb11u1) ____ ____________ (4.1.46-1+deb11u1) ___
__________ __________ ____ ____________________ ____________ pulseaudio-qubes.
____________________ __ ____________________ ___/18-pulseaudio-qubes_4.2.11-1+deb11u1_amd64.deb ___
______________________________ pulseaudio-qubes (4.2.11-1+deb11u1) ___
____________________ __ ____________________ ___/19-xserver-xorg-video-dummyqbs_4.2.11-1+deb11u1_amd64.deb ___
______________________________ xserver-xorg-video-dummyqbs (4.2.11-1+deb11u1) ____ ____________ (4.1.32-1+deb11u1) ___
____________________ __ ____________________ ___/20-qubes-gui-agent_4.2.11-1+deb11u1_amd64.deb ___
______________________________ qubes-gui-agent (4.2.11-1+deb11u1) ____ ____________ (4.1.32-1+deb11u1) ___
____________________ __ ____________________ ___/21-xserver-xorg-input-qubes_4.2.11-1+deb11u1_amd64.deb ___
______________________________ xserver-xorg-input-qubes (4.2.11-1+deb11u1) ____ ____________ (4.1.32-1+deb11u1) ___
____________________ __ ____________________ ___/22-xserver-xorg-qubes-common_4.2.11-1+deb11u1_amd64.deb ___
______________________________ xserver-xorg-qubes-common (4.2.11-1+deb11u1) ____ ____________ (4.1.32-1+deb11u1) ___
____________________ __ ____________________ ___/23-qubes-kernel-vm-support_4.2.15+deb11u1_amd64.deb ___
______________________________ qubes-kernel-vm-support (4.2.15+deb11u1) ____ ____________ (4.1.19+deb11u1) ___
____________________ __ ____________________ ___/24-qubes-mgmt-salt-vm-connector_4.2.1-1+deb11u1_all.deb ___
______________________________ qubes-mgmt-salt-vm-connector (4.2.1-1+deb11u1) ____ ____________ (4.1.16-1+deb11u1) ___
____________________ __ ____________________ ___/25-qubes-vm-dependencies_4.2.9-1+deb11u1_amd64.deb ___
______________________________ qubes-vm-dependencies (4.2.9-1+deb11u1) ____ ____________ (4.1.24-1+deb11u1) ___
__________________________ __________ libvchan-xen1 (4.2.1-1+deb11u1) ___
__________________________ __________ qubes-mgmt-salt-vm-connector (4.2.1-1+deb11u1) ___
______________________________ __________ ____________ __________ __________________ /etc/qubes-rpc/qubes.SaltLinuxVM ___
__________________________ __________ python3-pyinotify (0.9.6-1.3) ___
__________________________ __________ qubes-core-agent-passwordless-root (4.2.26-1+deb11u1) ___
__________________________ __________ qubes-utils (4.2.15+deb11u1) ___
__________________________ __________ python3-qrexec (4.2.16-1+deb11u1) ___
__________________________ __________ xserver-xorg-qubes-common (4.2.11-1+deb11u1) ___
__________________________ __________ qubes-kernel-vm-support (4.2.15+deb11u1) ___
update-initramfs: deferring update (trigger activated)
Generating grub configuration file ...
Warning: os-prober will not be executed to detect other bootable partitions.
Systems on them will not be added to the GRUB boot configuration.
Check GRUB_DISABLE_OS_PROBER documentation entry.
done
__________________________ __________ python3-qubesimgconverter (4.2.15+deb11u1) ___
__________________________ __________ libqubesdb (4.2.4-1+deb11u1) ___
__________________________ __________ python3-qubesdb (4.2.4-1+deb11u1) ___
__________________________ __________ xserver-xorg-input-qubes (4.2.11-1+deb11u1) ___
__________________________ __________ xserver-xorg-video-dummyqbs (4.2.11-1+deb11u1) ___
__________________________ __________ libqubes-pure0 (4.2.15+deb11u1) ___
__________________________ __________ libqrexec-utils2 (4.2.16-1+deb11u1) ___
__________________________ __________ qubesdb (4.2.4-1+deb11u1) ___
__________________________ __________ qubesdb-vm (4.2.4-1+deb11u1) ___
__________________________ __________ qubes-core-qrexec (4.2.16-1+deb11u1) ___
/usr/sbin/policy-rc.d returned 101, not running 'restart qubes-qrexec-agent.service'
__________________________ __________ libqubes-rpc-filecopy2 (4.2.15+deb11u1) ___
__________________________ __________ qubes-core-agent (4.2.26-1+deb11u1) ___

________ __________________ __/etc/apt/sources.list.d/qubes-r4.list__
 ==> ______________ __ ______________ __________________ (________ ______ __________________).
 ==> __________ ____________ ______________________ ______________________ ____________.
 ==> ____ __________________ ______________________ ____________ ________ __________________.
______________________________ __________ ____________ __________ __________________ /etc/default/grub.d/30-qubes.cfg ___
______________________________ __________ ____________ __________ __________________ /etc/fstab ___
______________________________ __________ ____________ __________ __________________ /etc/qubes-rpc/qubes.GetDate ___
______________________________ __________ ____________ __________ __________________ /etc/qubes-rpc/qubes.GetImageRGBA ___
______________________________ __________ ____________ __________ __________________ /etc/qubes/post-install.d/10-qubes-core-agent-features.sh ___
______________________________ __________ ____________ __________ __________________ /etc/sysctl.d/80-qubes.conf ___
______________________________ __________ ____________ __________ __________________ /etc/systemd/system/xendriverdomain.service ___
Removed /etc/systemd/system/sysinit.target.wants/haveged.service.
Created symlink /etc/systemd/system/sysinit.target.wants/haveged.service ___ /lib/systemd/system/haveged.service.
______________________ ______________________ /etc/init/plymouth-shutdown.conf __ /etc/init/plymouth-shutdown.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/prefdm.conf __ /etc/init/prefdm.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/splash-manager.conf __ /etc/init/splash-manager.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/start-ttys.conf __ /etc/init/start-ttys.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/tty.conf __ /etc/init/tty.conf.qubes-disabled ____-____ qubes-core-agent__
______________________ ______________________ /etc/init/serial.conf __ /etc/init/serial.conf.qubes-orig ____-____ qubes-core-agent__
Traceback (most recent call last):
  File "/usr/bin/qvm-features-request", line 111, in <module>
    sys.exit(main())
  File "/usr/bin/qvm-features-request", line 102, in main
    subprocess.check_call(
  File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['qrexec-client-vm', 'dom0', 'qubes.FeaturesRequest']' returned non-zero exit status 1.
qubes-sync-time.service is a disabled or a static unit not running, not starting it.
qubes-update-check.service is a disabled or a static unit not running, not starting it.
Job for qubes-mount-dirs.service failed because the control process exited with error code.
See "systemctl status qubes-mount-dirs.service" and "journalctl -xe" for details.
__________________________ __________ qubes-core-agent-nautilus (4.2.26-1+deb11u1) ___
__________________________ __________ qubes-core-agent-thunar (4.2.26-1+deb11u1) ___
__________________________ __________ pulseaudio-qubes (4.2.11-1+deb11u1) ___
__________________________ __________ qubes-whonix-workstation-packages-recommended (1:17.3-1) ___
____________________________ ________________ ______ man-db (2.9.4-2) ___
____________________________ ________________ ______ mailcap (3.69) ___
____________________________ ________________ ______ desktop-file-utils (0.26-1) ___
____________________________ ________________ ______ libglib2.0-0:amd64 (2.66.8-1) ___
____________________________ ________________ ______ libc-bin (2.31-13+deb11u7) ___
__________________________ __________ qubes-gui-agent (4.2.11-1+deb11u1) ___
______________________________ __________ ____________ __________ __________________ /etc/X11/xorg-qubes.conf.template ___
______________________________ __________ ____________ __________ __________________ /etc/qubes/post-install.d/20-qubes-guivm-gui-agent.sh ___
______________________________ __________ ____________ __________ __________________ /etc/security/limits.d/90-qubes-gui.conf ___
__________________________ __________ qubes-core-agent-networking (4.2.26-1+deb11u1) ___
______________________________ __________ ____________ __________ __________________ /etc/udev/rules.d/99-qubes-network.rules ___
______________________________ __________ ____________ __________ __________________ /etc/xen/scripts/vif-qubes-nat.sh ___
______________________________ __________ ____________ __________ __________________ /etc/xen/scripts/vif-route-qubes ___
__________________________ __________ qubes-vm-dependencies (4.2.9-1+deb11u1) ___
____________________________ ________________ ______ qubes-core-agent (4.2.26-1+deb11u1) ___
Traceback (most recent call last):
  File "/usr/bin/qvm-features-request", line 111, in <module>
    sys.exit(main())
  File "/usr/bin/qvm-features-request", line 102, in main
    subprocess.check_call(
  File "/usr/lib/python3.9/subprocess.py", line 373, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['qrexec-client-vm', 'dom0', 'qubes.FeaturesRequest']' returned non-zero exit status 1.
____________________________ ________________ ______ initramfs-tools (0.140) ___
+ rm -f /usr/sbin/policy-rc.d
---> (STAGE 5) Synchronizing menu entries and supported features
Running 'qubes.PostInstall' on debian-11
Running 'qubes.PostInstall' on fedora-37
Running 'qubes.PostInstall' on whonix-gw-16
Running 'qubes.PostInstall' on whonix-ws-16
anon-whonix: Creating appmenus
debian-11: Creating appmenus
debian-11-dvm: Creating appmenus
personal: Creating appmenus
sys-net: Creating appmenus
untrusted: Creating appmenus
vault: Creating appmenus
vault-for-usb-transfered-files: Creating appmenus
work: Creating appmenus
debian-11-dvm: Creating appmenus
sys-firewall: Creating appmenus
sys-usb: Creating appmenus
fedora-37: Creating appmenus
personal: Creating appmenus
sys-firewall: Creating appmenus
sys-net: Creating appmenus
sys-usb: Creating appmenus
sys-whonix: Creating appmenus
untrusted: Creating appmenus
vault: Creating appmenus
vault-for-usb-transfered-files: Creating appmenus
whonix-gw-16: Creating appmenus
sys-whonix: Creating appmenus
whonix-ws-16: Creating appmenus
anon-whonix: Creating appmenus
whonix-ws-16-dvm: Creating appmenus
whonix-ws-16-dvm: Creating appmenus
work: Creating appmenus
---> (STAGE 5) Cleaning up salt
Error on ext_pillar interface qvm_prefs is expected
local:
    True
[CRITICAL] Specified ext_pillar interface qvm_prefs is unavailable
local:
    ----------
    beacons:
    clouds:
    engines:
    executors:
    grains:
        - grains.boot_mode
        - grains.pci_devs
        - grains.redefined_dom0_grains
        - grains.whonix
    log_handlers:
    matchers:
    modules:
        - modules.debug
        - modules.ext_module_qvm
        - modules.module_utils
        - modules.qubes
        - modules.qubes_dom0_update
        - modules.topd
    output:
    pillar:
        - pillar.qvm_prefs
    proxymodules:
    renderers:
    returners:
    sdb:
    serializers:
    states:
        - states.debug
        - states.ext_state_qvm
        - states.status
    thorium:
    utils:
        - utils.__init__
        - utils.fileinfo
        - utils.matcher
        - utils.nulltype
        - utils.pathinfo
        - utils.pathutils
        - utils.qubes_utils
        - utils.toputils
---> (STAGE 5) Adjusting default kernel
Changing default kernel from 6.1.62-1.fc32 to 6.1.62-1.fc32
  Logical volume "Qubes41UpgradeBackup" successfully removed
---> (STAGE 6) Convert qrexec policy to the new format, it may take several minutes
/usr/sbin/qubes-dist-upgrade: строка 468: qrexec-legacy-convert: команда не найдена

I will not try to do manual upgrade anymore and have to do clear installation. I created this post just for people to know. Is there anyone else who had the same problem? I repeat: I had exactly 4.1 version. It’s not a mistake. I installed from 4.1 image so version is exactly correct and should have to upgrade to 4.2.

@Qubie I edited your post to replace the quoted blocks by code blocks (pre-formatted text). Text in quotes is interpreted as Markdown, and logs are usually more readable as code blocks.